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  5. Mp6g12440.1

Mp6g12440.1


Description : transcription factor (TUB)


Gene families : OG_01_0000361 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000361_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g12440.1
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT1G61940 No alias tubby like protein 4 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_9874V3.1 No alias tubby like protein 3 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004112 cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004114 3',5'-cyclic-nucleotide phosphodiesterase activity IEP HCCA
MF GO:0004356 glutamate-ammonia ligase activity IEP HCCA
MF GO:0004864 protein phosphatase inhibitor activity IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006541 glutamine metabolic process IEP HCCA
BP GO:0006542 glutamine biosynthetic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006928 movement of cell or subcellular component IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP HCCA
MF GO:0008373 sialyltransferase activity IEP HCCA
MF GO:0008417 fucosyltransferase activity IEP HCCA
BP GO:0009084 glutamine family amino acid biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009187 cyclic nucleotide metabolic process IEP HCCA
BP GO:0009190 cyclic nucleotide biosynthetic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
BP GO:0010921 regulation of phosphatase activity IEP HCCA
BP GO:0010970 transport along microtubule IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016211 ammonia ligase activity IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP HCCA
MF GO:0019208 phosphatase regulator activity IEP HCCA
MF GO:0019212 phosphatase inhibitor activity IEP HCCA
BP GO:0019220 regulation of phosphate metabolic process IEP HCCA
MF GO:0019888 protein phosphatase regulator activity IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0030705 cytoskeleton-dependent intracellular transport IEP HCCA
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP HCCA
BP GO:0031399 regulation of protein modification process IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0032268 regulation of cellular protein metabolic process IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
BP GO:0035303 regulation of dephosphorylation IEP HCCA
BP GO:0035304 regulation of protein dephosphorylation IEP HCCA
BP GO:0042073 intraciliary transport IEP HCCA
BP GO:0042546 cell wall biogenesis IEP HCCA
BP GO:0043666 regulation of phosphoprotein phosphatase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
BP GO:0051174 regulation of phosphorus metabolic process IEP HCCA
BP GO:0051336 regulation of hydrolase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0099111 microtubule-based transport IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000007 Tubby_C 360 600
No external refs found!