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  5. Mp6g19210.1

Mp6g19210.1


Description : DEAD-box ATP-dependent RNA helicase 5 OS=Arabidopsis thaliana (sp|q9c551|rh5_arath : 604.0)


Gene families : OG_01_0007079 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0007079_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g19210.1
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
Cre12.g539100 No alias DEAD-box ATP-dependent RNA helicase 5 OS=Oryza sativa... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_4750V3.1 No alias DEA(D/H)-box RNA helicase family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008173 RNA methyltransferase activity IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 378 487
IPR011545 DEAD/DEAH_box_helicase_dom 169 338
No external refs found!