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  5. Mp6g19820.1

Mp6g19820.1


Description : 30S ribosomal protein S1, chloroplastic OS=Spinacia oleracea (sp|p29344|rr1_spiol : 88.6)


Gene families : OG_01_0005130 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005130_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp6g19820.1
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT3G23700 No alias Nucleic acid-binding proteins superfamily 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre03.g148950 No alias 30S ribosomal protein S1, chloroplastic OS=Arabidopsis thaliana 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_26600V3.1 No alias Nucleic acid-binding proteins superfamily 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08413.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
MF GO:0005244 voltage-gated ion channel activity IEP HCCA
MF GO:0005247 voltage-gated chloride channel activity IEP HCCA
MF GO:0005253 anion channel activity IEP HCCA
MF GO:0005254 chloride channel activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006811 ion transport IEP HCCA
BP GO:0006812 cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006821 chloride transport IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0008308 voltage-gated anion channel activity IEP HCCA
MF GO:0008324 cation transmembrane transporter activity IEP HCCA
MF GO:0008509 anion transmembrane transporter activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0015075 ion transmembrane transporter activity IEP HCCA
MF GO:0015103 inorganic anion transmembrane transporter activity IEP HCCA
MF GO:0015298 solute:cation antiporter activity IEP HCCA
MF GO:0015299 solute:proton antiporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022832 voltage-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0030001 metal ion transport IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
InterPro domains Description Start Stop
IPR003029 S1_domain 144 220
IPR003029 S1_domain 234 310
No external refs found!