Mp7g04330.1

Description : Small RNA degrading nuclease 5 OS=Arabidopsis thaliana (sp|q8l7m4|sdn5_arath : 444.0)

Gene families : OG_01_0003893 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003893_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Mp7g04330.1
Cluster	HCCA: Cluster_104

Target	Alias	Description	ECC score	Gene Family Method	Actions
Pp3c1_5030V3.1	No alias	Polynucleotidyl transferase, ribonuclease H-like...	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
No GO annotation available for this sequence

Type	GO Term	Name	Evidence	Source
MF	GO:0000049	tRNA binding	IEP	HCCA
BP	GO:0000105	histidine biosynthetic process	IEP	HCCA
MF	GO:0003723	RNA binding	IEP	HCCA
MF	GO:0004177	aminopeptidase activity	IEP	HCCA
MF	GO:0004518	nuclease activity	IEP	HCCA
MF	GO:0004540	ribonuclease activity	IEP	HCCA
MF	GO:0005488	binding	IEP	HCCA
CC	GO:0005777	peroxisome	IEP	HCCA
BP	GO:0006298	mismatch repair	IEP	HCCA
BP	GO:0006547	histidine metabolic process	IEP	HCCA
BP	GO:0007031	peroxisome organization	IEP	HCCA
MF	GO:0008915	lipid-A-disaccharide synthase activity	IEP	HCCA
BP	GO:0009245	lipid A biosynthetic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
MF	GO:0030983	mismatched DNA binding	IEP	HCCA
BP	GO:0032259	methylation	IEP	HCCA
CC	GO:0042579	microbody	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
BP	GO:0046493	lipid A metabolic process	IEP	HCCA
MF	GO:0140640	catalytic activity, acting on a nucleic acid	IEP	HCCA
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	HCCA
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013520	Exonuclease_RNaseT/DNA_pol3	274	422

External Links

No external refs found!