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Description : associated component SAP30 of histone deacetylase machineries
Gene families : OG_01_0005472 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005472_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Mp7g07500.1 | |
| Cluster | HCCA: Cluster_54 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Pp3c20_6230V3.1 | No alias | RING/FYVE/PHD-type zinc finger family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c24_15970V3.1 | No alias | RING/FYVE/PHD-type zinc finger family protein | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000444 | MIS12/MIND type complex | IEP | HCCA |
| CC | GO:0000818 | nuclear MIS12/MIND complex | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0003905 | alkylbase DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0004421 | hydroxymethylglutaryl-CoA synthase activity | IEP | HCCA |
| MF | GO:0005516 | calmodulin binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| BP | GO:0006284 | base-excision repair | IEP | HCCA |
| BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
| BP | GO:0006950 | response to stress | IEP | HCCA |
| BP | GO:0007010 | cytoskeleton organization | IEP | HCCA |
| MF | GO:0008017 | microtubule binding | IEP | HCCA |
| MF | GO:0008092 | cytoskeletal protein binding | IEP | HCCA |
| BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
| MF | GO:0008725 | DNA-3-methyladenine glycosylase activity | IEP | HCCA |
| MF | GO:0015631 | tubulin binding | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| MF | GO:0016746 | acyltransferase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016788 | hydrolase activity, acting on ester bonds | IEP | HCCA |
| MF | GO:0016799 | hydrolase activity, hydrolyzing N-glycosyl compounds | IEP | HCCA |
| MF | GO:0019104 | DNA N-glycosylase activity | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| MF | GO:0030599 | pectinesterase activity | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| BP | GO:0042545 | cell wall modification | IEP | HCCA |
| MF | GO:0043733 | DNA-3-methylbase glycosylase activity | IEP | HCCA |
| MF | GO:0046912 | acyltransferase, acyl groups converted into alkyl on transfer | IEP | HCCA |
| BP | GO:0050896 | response to stimulus | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140657 | ATP-dependent activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR025718 | SAP30_Sin3-bd | 171 | 222 |
| No external refs found! |