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  5. AT1G71150

AT1G71150


Description : unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G22970.1); Has 105 Blast hits to 103 proteins in 41 species: Archae - 0; Bacteria - 2; Metazoa - 42; Fungi - 6; Plants - 48; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink).


Gene families : OG_01_0005899 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005899_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71150
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G22980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
BP GO:0000959 mitochondrial RNA metabolic process IEP HCCA
MF GO:0000976 transcription cis-regulatory region binding IEP HCCA
MF GO:0000987 cis-regulatory region sequence-specific DNA binding IEP HCCA
MF GO:0001067 transcription regulatory region nucleic acid binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003909 DNA ligase activity IEP HCCA
MF GO:0003910 DNA ligase (ATP) activity IEP HCCA
MF GO:0004108 citrate (Si)-synthase activity IEP HCCA
CC GO:0005851 eukaryotic translation initiation factor 2B complex IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006266 DNA ligation IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006352 DNA-templated transcription, initiation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007129 homologous chromosome pairing at meiosis IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0016093 polyprenol metabolic process IEP HCCA
BP GO:0016094 polyprenol biosynthetic process IEP HCCA
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP HCCA
BP GO:0019348 dolichol metabolic process IEP HCCA
BP GO:0019408 dolichol biosynthetic process IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
BP GO:0031324 negative regulation of cellular metabolic process IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
MF GO:0036440 citrate synthase activity IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046912 acyltransferase, acyl groups converted into alkyl on transfer IEP HCCA
BP GO:0048830 adventitious root development IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0051172 negative regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0070192 chromosome organization involved in meiotic cell cycle IEP HCCA
BP GO:0080156 mitochondrial mRNA modification IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
BP GO:1900864 mitochondrial RNA modification IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
MF GO:1990837 sequence-specific double-stranded DNA binding IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G71150