Description : winged-helix DNA-binding transcription factor family protein
Gene families : OG_01_0000932 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000932_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Cre06.g275900 | No alias | Chromatin organisation.histones.H1 linker histone | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
Cre13.g567450 | No alias | Chromatin organisation.histones.H1 linker histone | 0.33 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
Mp6g03150.1 | No alias | linker histone (H1) | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
Pp3c18_19330V3.1 | No alias | winged-helix DNA-binding transcription factor family protein | 0.04 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000786 | nucleosome | ISS | Interproscan |
MF | GO:0003677 | DNA binding | ISS | Interproscan |
CC | GO:0005634 | nucleus | ISM | Interproscan |
BP | GO:0006334 | nucleosome assembly | ISS | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004067 | asparaginase activity | IEP | HCCA |
CC | GO:0005730 | nucleolus | IEP | HCCA |
BP | GO:0006516 | glycoprotein catabolic process | IEP | HCCA |
BP | GO:0006528 | asparagine metabolic process | IEP | HCCA |
BP | GO:0006530 | asparagine catabolic process | IEP | HCCA |
BP | GO:0009063 | cellular amino acid catabolic process | IEP | HCCA |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | HCCA |
BP | GO:0009065 | glutamine family amino acid catabolic process | IEP | HCCA |
BP | GO:0009066 | aspartate family amino acid metabolic process | IEP | HCCA |
BP | GO:0009068 | aspartate family amino acid catabolic process | IEP | HCCA |
BP | GO:0009100 | glycoprotein metabolic process | IEP | HCCA |
BP | GO:0009292 | genetic transfer | IEP | HCCA |
BP | GO:0009294 | DNA mediated transformation | IEP | HCCA |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | HCCA |
BP | GO:0033345 | asparagine catabolic process via L-aspartate | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0044764 | multi-organism cellular process | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0051704 | multi-organism process | IEP | HCCA |
BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
BP | GO:1901606 | alpha-amino acid catabolic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR005818 | Histone_H1/H5_H15 | 62 | 128 |
PLAZA 3.0 Dicots | AT1G06760 |