AT1G06760


Description : winged-helix DNA-binding transcription factor family protein


Gene families : OG_01_0000932 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000932_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G06760

Target Alias Description ECC score Gene Family Method Actions
Cre06.g275900 No alias Chromatin organisation.histones.H1 linker histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g567450 No alias Chromatin organisation.histones.H1 linker histone 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g03150.1 No alias linker histone (H1) 0.14 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_19330V3.1 No alias winged-helix DNA-binding transcription factor family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome ISS Interproscan
MF GO:0003677 DNA binding ISS Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006334 nucleosome assembly ISS Interproscan
Type GO Term Name Evidence Source
MF GO:0004067 asparaginase activity IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006516 glycoprotein catabolic process IEP HCCA
BP GO:0006528 asparagine metabolic process IEP HCCA
BP GO:0006530 asparagine catabolic process IEP HCCA
BP GO:0009063 cellular amino acid catabolic process IEP HCCA
BP GO:0009064 glutamine family amino acid metabolic process IEP HCCA
BP GO:0009065 glutamine family amino acid catabolic process IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009068 aspartate family amino acid catabolic process IEP HCCA
BP GO:0009100 glycoprotein metabolic process IEP HCCA
BP GO:0009292 genetic transfer IEP HCCA
BP GO:0009294 DNA mediated transformation IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0033345 asparagine catabolic process via L-aspartate IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0044764 multi-organism cellular process IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0051704 multi-organism process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901606 alpha-amino acid catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR005818 Histone_H1/H5_H15 62 128
PLAZA 3.0 Dicots AT1G06760