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  5. AT1G71320

AT1G71320


Description : F-box family protein


Gene families : OG_01_0000183 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G71320
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT1G12855 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G12870 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G33530 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G30385 No alias No description available 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G34280 No alias F-box and associated interaction domains-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G62380 No alias CONTAINS InterPro DOMAIN/s: F-box associated interaction... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G17780 No alias F-box and associated interaction domains-containing protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
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Type GO Term Name Evidence Source
MF GO:0003883 CTP synthase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
InterPro domains Description Start Stop
IPR006527 F-box-assoc_dom_typ1 249 342
PLAZA 3.0 Dicots AT1G71320