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  5. Mp7g16200.1

Mp7g16200.1


Description : histone (H3)


Gene families : OG_01_0000031 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000031_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp7g16200.1
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G09200 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G27360 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G10390 No alias Histone superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G10400 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G65360 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264650 No alias Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265250 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265500 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g266650 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g267950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268350 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274000 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274101 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274350 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275750 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276600 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504650 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504800 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505500 No alias Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506300 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506500 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g569950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre16.g650300 No alias Chromatin organisation.histones.H3-type histone 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708150 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g708700 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709050 No alias Chromatin organisation.histones.H3-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710550 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711850 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713550 No alias Chromatin organisation.histones.H3-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713950 No alias Chromatin organisation.histones.H3-type histone 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714650 No alias Chromatin organisation.histones.H3-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g09090.1 No alias histone (H3) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_14470V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_14481V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_20670V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c22_8680V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c23_15100V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_11100V3.1 No alias Histone superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_13230V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_2810V3.1 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_03578.1 No alias histone (H3) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_13653.1 No alias histone (H3) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP HCCA
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003964 RNA-directed DNA polymerase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005664 nuclear origin of replication recognition complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006270 DNA replication initiation IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0022402 cell cycle process IEP HCCA
BP GO:0022414 reproductive process IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
CC GO:0098687 chromosomal region IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1903046 meiotic cell cycle process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 1 132
No external refs found!