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  5. Mp8g04540.1

Mp8g04540.1


Description : component VPS28 of ESCRT-I complex


Gene families : OG_01_0003475 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003475_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g04540.1
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
AT4G05000 No alias Vacuolar protein sorting-associated protein VPS28 family protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000813 ESCRT I complex IEA Interproscan
BP GO:0032509 endosome transport via multivesicular body sorting pathway IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
BP GO:0030163 protein catabolic process IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
InterPro domains Description Start Stop
IPR007143 Vps28 24 208
No external refs found!