1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G72840

AT1G72840


Description : Disease resistance protein (TIR-NBS-LRR class)


Gene families : OG_01_0000012 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000012_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G72840
Cluster HCCA: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
AT5G41550 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G41740 No alias Disease resistance protein (TIR-NBS-LRR class) family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c26_15380V3.1 No alias disease resistance protein (TIR-NBS-LRR class), putative 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005739 mitochondrion ISM Interproscan
BP GO:0006952 defense response ISS Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
MF GO:0005046 KDEL sequence binding IEP HCCA
MF GO:0005048 signal sequence binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005801 cis-Golgi network IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
BP GO:0006621 protein retention in ER lumen IEP HCCA
MF GO:0008022 protein C-terminus binding IEP HCCA
MF GO:0008889 glycerophosphodiester phosphodiesterase activity IEP HCCA
BP GO:0010200 response to chitin IEP HCCA
BP GO:0010243 response to organonitrogen compound IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0030002 cellular anion homeostasis IEP HCCA
BP GO:0030643 cellular phosphate ion homeostasis IEP HCCA
BP GO:0032507 maintenance of protein location in cell IEP HCCA
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP HCCA
MF GO:0042277 peptide binding IEP HCCA
BP GO:0042343 indole glucosinolate metabolic process IEP HCCA
BP GO:0045185 maintenance of protein location IEP HCCA
MF GO:0046923 ER retention sequence binding IEP HCCA
BP GO:0051651 maintenance of location in cell IEP HCCA
BP GO:0055062 phosphate ion homeostasis IEP HCCA
BP GO:0055081 anion homeostasis IEP HCCA
BP GO:0072502 cellular trivalent inorganic anion homeostasis IEP HCCA
BP GO:0072506 trivalent inorganic anion homeostasis IEP HCCA
BP GO:0072595 maintenance of protein localization in organelle IEP HCCA
BP GO:0080036 regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080037 negative regulation of cytokinin-activated signaling pathway IEP HCCA
BP GO:0080167 response to karrikin IEP HCCA
BP GO:0098771 inorganic ion homeostasis IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901698 response to nitrogen compound IEP HCCA
BP GO:2000280 regulation of root development IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002182 NB-ARC 200 429
IPR000157 TIR_dom 15 182
IPR011713 Leu-rich_rpt_3 606 623
PLAZA 3.0 Dicots AT1G72840