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  5. Mp8g15290.1

Mp8g15290.1


Description : subunit alpha of methylcrotonoyl-CoA carboxylase complex


Gene families : OG_01_0004193 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004193_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Mp8g15290.1
Cluster HCCA: Cluster_148

Target Alias Description ECC score Gene Family Method Actions
AT1G03090 No alias methylcrotonyl-CoA carboxylase alpha chain,... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g278098 No alias Amino acid metabolism.degradation.branched-chain amino... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c18_10570V3.1 No alias methylcrotonyl-CoA carboxylase alpha chain,... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_12949.1 No alias subunit alpha of methylcrotonoyl-CoA carboxylase complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP HCCA
MF GO:0004594 pantothenate kinase activity IEP HCCA
MF GO:0004797 thymidine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
BP GO:0015936 coenzyme A metabolic process IEP HCCA
BP GO:0015937 coenzyme A biosynthetic process IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019136 deoxynucleoside kinase activity IEP HCCA
MF GO:0019205 nucleobase-containing compound kinase activity IEP HCCA
MF GO:0019206 nucleoside kinase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033866 nucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034030 ribonucleoside bisphosphate biosynthetic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034033 purine nucleoside bisphosphate biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR005479 CbamoylP_synth_lsu-like_ATP-bd 215 423
IPR005482 Biotin_COase_C 437 545
IPR005481 BC-like_N 102 210
IPR000089 Biotin_lipoyl 747 812
No external refs found!