1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c10_11530V3.1

Pp3c10_11530V3.1


Description : DNA-directed RNA polymerase family protein


Gene families : OG_01_0000388 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000388_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_11530V3.1
Cluster HCCA: Cluster_159

Target Alias Description ECC score Gene Family Method Actions
Pp3c20_3310V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c21_8540V3.1 No alias nuclear RNA polymerase C2 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_8970V3.1 No alias DNA-directed RNA polymerase family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_1420V3.1 No alias nuclear RNA polymerase C2 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_1680V3.1 No alias DNA-directed RNA polymerase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_12710V3.1 No alias DNA-directed RNA polymerase family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEA Interproscan
BP GO:0006351 transcription, DNA-templated IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR007646 RNA_pol_Rpb2_4 415 472
IPR007645 RNA_pol_Rpb2_3 328 391
IPR007120 DNA-dir_RNAP_su2_dom 508 836
IPR007641 RNA_pol_Rpb2_7 838 920
No external refs found!