Pp3c10_12450V3.1

Description : plastid ribosomal protein l11

Gene families : OG_01_0002910 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002910_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c10_12450V3.1
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AT1G32990	No alias	plastid ribosomal protein l11	0.23	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre10.g423650	No alias	Protein biosynthesis.organelle translation...	0.2	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp7g12110.1	No alias	component psRPL11 of large ribosomal subunit proteome	0.24	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_02254.1	No alias	component uL11c of large ribosomal subunit proteome	0.07	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	HCCA
MF	GO:0003824	catalytic activity	IEP	HCCA
MF	GO:0004356	glutamate-ammonia ligase activity	IEP	HCCA
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
MF	GO:0004751	ribose-5-phosphate isomerase activity	IEP	HCCA
MF	GO:0004812	aminoacyl-tRNA ligase activity	IEP	HCCA
BP	GO:0006082	organic acid metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006418	tRNA aminoacylation for protein translation	IEP	HCCA
BP	GO:0006520	cellular amino acid metabolic process	IEP	HCCA
BP	GO:0006541	glutamine metabolic process	IEP	HCCA
BP	GO:0006542	glutamine biosynthetic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0009052	pentose-phosphate shunt, non-oxidative branch	IEP	HCCA
BP	GO:0009064	glutamine family amino acid metabolic process	IEP	HCCA
BP	GO:0009084	glutamine family amino acid biosynthetic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
MF	GO:0016211	ammonia ligase activity	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
MF	GO:0016853	isomerase activity	IEP	HCCA
MF	GO:0016859	cis-trans isomerase activity	IEP	HCCA
MF	GO:0016860	intramolecular oxidoreductase activity	IEP	HCCA
MF	GO:0016861	intramolecular oxidoreductase activity, interconverting aldoses and ketoses	IEP	HCCA
MF	GO:0016874	ligase activity	IEP	HCCA
MF	GO:0016875	ligase activity, forming carbon-oxygen bonds	IEP	HCCA
MF	GO:0016879	ligase activity, forming carbon-nitrogen bonds	IEP	HCCA
MF	GO:0016880	acid-ammonia (or amide) ligase activity	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019752	carboxylic acid metabolic process	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
MF	GO:0030145	manganese ion binding	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0043038	amino acid activation	IEP	HCCA
BP	GO:0043039	tRNA aminoacylation	IEP	HCCA
BP	GO:0043436	oxoacid metabolic process	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0044281	small molecule metabolic process	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901607	alpha-amino acid biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR020783	Ribosomal_L11_C	180	248
IPR020784	Ribosomal_L11_N	111	175

External Links

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Pp3c10_12450V3.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation