AT1G74620

Description : RING/U-box superfamily protein

Gene families : OG_01_0002010 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002010_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G74620
Cluster	HCCA: Cluster_278

Target	Alias	Description	ECC score	Gene Family Method
AT1G18760	No alias	Zinc finger, C3HC4 type (RING finger) family protein	0.01	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G18780	No alias	RING/U-box superfamily protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G21960	No alias	RING/U-box superfamily protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G29840	No alias	RING/U-box superfamily protein	0.05	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005737	cytoplasm	ISM	Interproscan
MF	GO:0008270	zinc ion binding	ISS	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0005739	mitochondrion	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001841	Znf_RING	183	225

External Links

PLAZA 3.0 Dicots	AT1G74620