1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c10_20120V3.1

Pp3c10_20120V3.1


Description : Pectin lyase-like superfamily protein


Gene families : OG_01_0005618 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005618_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_20120V3.1
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
Mp5g03920.1 No alias pectin methylesterase 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g03930.1 No alias pectin methylesterase 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_35240V3.1 No alias Pectin lyase-like superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!