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  5. Pp3c10_22940V3.1

Pp3c10_22940V3.1


Description : Small nuclear ribonucleoprotein family protein


Gene families : OG_01_0002151 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002151_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_22940V3.1
Cluster HCCA: Cluster_272

Target Alias Description ECC score Gene Family Method Actions
AT4G20440 No alias small nuclear ribonucleoprotein associated protein B 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g611150 No alias RNA processing.RNA splicing.U1/U2/U4/U5-associated Sm... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g10960.1 No alias component Sm-B of U1/U2/U4/U5-associated Sm accessory... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0009987 cellular process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA

No InterPro domains available for this sequence

No external refs found!