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  5. Pp3c10_24320V3.1

Pp3c10_24320V3.1


Description : No annotation


Gene families : OG_01_0032977 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_24320V3.1
Cluster HCCA: Cluster_65


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006313 transposition, DNA-mediated IEP HCCA
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
CC GO:0018995 host cellular component IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0032196 transposition IEP HCCA
CC GO:0032993 protein-DNA complex IEP HCCA
CC GO:0033643 host cell part IEP HCCA
CC GO:0033646 host intracellular part IEP HCCA
CC GO:0033647 host intracellular organelle IEP HCCA
CC GO:0033648 host intracellular membrane-bounded organelle IEP HCCA
BP GO:0034622 cellular protein-containing complex assembly IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
CC GO:0042025 host cell nucleus IEP HCCA
BP GO:0043933 protein-containing complex subunit organization IEP HCCA
CC GO:0044815 DNA packaging complex IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!
BP GO:0010629 negative regulation of gene expression IEP HCCA MF GO:0015075 ion transmembrane transporter activity IEP HCCA MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA BP GO:0016070 RNA metabolic process IEP HCCA BP GO:0016071 mRNA metabolic process IEP HCCA BP GO:0016482 cytosolic transport IEP HCCA BP GO:0016569 obsolete covalent chromatin modification IEP HCCA BP GO:0016926 protein desumoylation IEP HCCA MF GO:0016929 SUMO-specific protease activity IEP HCCA BP GO:0019439 aromatic compound catabolic process IEP HCCA MF GO:0019783 ubiquitin-like protein-specific protease activity IEP HCCA BP GO:0022610 biological adhesion IEP HCCA BP GO:0030433 ubiquitin-dependent ERAD pathway IEP HCCA CC GO:0030904 retromer complex IEP HCCA BP GO:0032270 positive regulation of cellular protein metabolic process IEP HCCA MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA MF GO:0032934 sterol binding IEP HCCA BP GO:0034248 regulation of cellular amide metabolic process IEP HCCA BP GO:0034250 positive regulation of cellular amide metabolic process IEP HCCA BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA MF GO:0035064 methylated histone binding IEP HCCA BP GO:0036503 ERAD pathway IEP HCCA BP GO:0042127 regulation of cell population proliferation IEP HCCA BP GO:0042147 retrograde transport, endosome to Golgi IEP HCCA BP GO:0042743 hydrogen peroxide metabolic process IEP HCCA BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA BP GO:0044038 cell wall macromolecule biosynthetic process IEP HCCA BP GO:0044248 cellular catabolic process IEP HCCA BP GO:0044265 cellular macromolecule catabolic process IEP HCCA BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA BP GO:0045010 actin nucleation IEP HCCA BP GO:0045491 xylan metabolic process IEP HCCA BP GO:0045492 xylan biosynthetic process IEP HCCA BP GO:0045727 positive regulation of translation IEP HCCA BP GO:0046700 heterocycle catabolic process IEP HCCA BP GO:0048469 cell maturation IEP HCCA BP GO:0048518 positive regulation of biological process IEP HCCA BP GO:0048522 positive regulation of cellular process IEP HCCA BP GO:0048573 photoperiodism, flowering IEP HCCA BP GO:0048764 trichoblast maturation IEP HCCA BP GO:0048765 root hair cell differentiation IEP HCCA BP GO:0050665 hydrogen peroxide biosynthetic process IEP HCCA BP GO:0051247 positive regulation of protein metabolic process IEP HCCA BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA BP GO:0070589 cellular component macromolecule biosynthetic process IEP HCCA BP GO:0070592 cell wall polysaccharide biosynthetic process IEP HCCA BP GO:0070646 protein modification by small protein removal IEP HCCA BP GO:0070839 metal ion export IEP HCCA BP GO:0097435 supramolecular fiber organization IEP HCCA MF GO:0140030 modification-dependent protein binding IEP HCCA MF GO:0140034 methylation-dependent protein binding IEP HCCA BP GO:0140115 export across plasma membrane IEP HCCA BP GO:1901361 organic cyclic compound catabolic process IEP HCCA BP GO:1903409 reactive oxygen species biosynthetic process IEP HCCA BP GO:1903509 liposaccharide metabolic process IEP HCCA

No InterPro domains available for this sequence

PLAZA 3.0 Dicots AT1G02960