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  5. Pp3c10_9730V3.1

Pp3c10_9730V3.1


Description : 26S proteasome regulatory subunit, putative (RPN5)


Gene families : OG_01_0003607 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003607_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c10_9730V3.1
Cluster HCCA: Cluster_112

Target Alias Description ECC score Gene Family Method Actions
AT5G09900 No alias 26S proteasome regulatory subunit, putative (RPN5) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre14.g632775 No alias Protein degradation.26S proteasome.regulatory... 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g06620.1 No alias regulatory component RPN5 of 26S proteasome 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14639.1 No alias regulatory component RPN5 of 26S proteasome 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000717 PCI_dom 300 407
IPR040896 RPN5_C 414 446
No external refs found!