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  5. Pp3c11_13900V3.1

Pp3c11_13900V3.1


Description : DNA binding;nucleotide binding;nucleic acid binding;DNA-directed DNA polymerases;DNA-directed DNA polymerases


Gene families : OG_01_0000342 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000342_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_13900V3.1
Cluster HCCA: Cluster_81

Target Alias Description ECC score Gene Family Method Actions
Pp3c10_11570V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c10_25280V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_14490V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c13_14630V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_3970V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_3980V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_13700V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c15_13750V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_12570V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_17860V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c16_6050V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_290V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c25_2990V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_18826V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_29370V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_390V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_18830V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c4_24900V3.1 No alias No annotation 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c9_12701V3.1 No alias DNA binding;nucleotide binding;nucleic acid... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA

No InterPro domains available for this sequence

No external refs found!