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  5. Pp3c11_14960V3.1

Pp3c11_14960V3.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0003378 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003378_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_14960V3.1
Cluster HCCA: Cluster_280

Target Alias Description ECC score Gene Family Method Actions
Cre03.g178050 No alias WD repeat-containing protein GTS1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g14620.1 No alias WD repeat-containing protein GTS1 OS=Arabidopsis... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000428 DNA-directed RNA polymerase complex IEP HCCA
CC GO:0005666 RNA polymerase III complex IEP HCCA
BP GO:0006351 transcription, DNA-templated IEP HCCA
BP GO:0006383 transcription by RNA polymerase III IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
CC GO:0030880 RNA polymerase complex IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
CC GO:0055029 nuclear DNA-directed RNA polymerase complex IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!