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  5. Pp3c11_2580V3.1

Pp3c11_2580V3.1


Description : Nodulin MtN3 family protein


Gene families : OG_01_0000153 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c11_2580V3.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
AT2G39060 No alias Nodulin MtN3 family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g06250.1 No alias sugar efflux transporter (SWEET) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g23680.1 No alias sugar efflux transporter (SWEET) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g23690.1 No alias sugar efflux transporter (SWEET) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g24910.1 No alias sugar efflux transporter (SWEET) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g17890.1 No alias sugar efflux transporter (SWEET) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003830 beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004316 SWEET_sugar_transpr 9 77
IPR004316 SWEET_sugar_transpr 113 196
No external refs found!