Pp3c11_26000V3.1

Description : TCP-1/cpn60 chaperonin family protein

Gene families : OG_01_0003191 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003191_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c11_26000V3.1
Cluster	HCCA: Cluster_14

Target	Alias	Description	ECC score	Gene Family Method
AT3G02530	No alias	TCP-1/cpn60 chaperonin family protein	0.08	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G16070	No alias	TCP-1/cpn60 chaperonin family protein	0.09	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre09.g397200	No alias	Cytoskeleton.actin and tubulin folding.CCT chaperonin...	0.12	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g07530.1	No alias	CCT6 subunit zeta of CCT chaperonin folding complex	0.06	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_07507.1	No alias	subunit zeta of CCT chaperonin folding complex (CCT6)	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0003678	DNA helicase activity	IEP	HCCA
MF	GO:0003743	translation initiation factor activity	IEP	HCCA
MF	GO:0004576	oligosaccharyl transferase activity	IEP	HCCA
MF	GO:0004749	ribose phosphate diphosphokinase activity	IEP	HCCA
CC	GO:0005694	chromosome	IEP	HCCA
BP	GO:0006486	protein glycosylation	IEP	HCCA
MF	GO:0008094	ATP-dependent activity, acting on DNA	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
MF	GO:0016778	diphosphotransferase activity	IEP	HCCA
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	HCCA
BP	GO:0042254	ribosome biogenesis	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0044085	cellular component biogenesis	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA
MF	GO:0140097	catalytic activity, acting on DNA	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002423	Cpn60/TCP-1	29	528

External Links

No external refs found!