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Pp3c11_510V3.1


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_01_0002126 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002126_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c11_510V3.1
Cluster HCCA: Cluster_265

Target Alias Description ECC score Gene Family Method Actions
Cre06.g282600 No alias DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis thaliana 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g04780.1 No alias DEAD-box ATP-dependent RNA helicase 18 OS=Arabidopsis... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c11_500V3.1 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 34 205
IPR001650 Helicase_C 254 367
IPR025313 DUF4217 410 466
No external refs found!