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  5. AT1G76830

AT1G76830


Description : F-box and associated interaction domains-containing protein


Gene families : OG_01_0000008 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G76830
Cluster HCCA: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
AT1G30920 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G31090 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G32420 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G52490 No alias CONTAINS InterPro DOMAIN/s: F-box domain, cyclin-like... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G61060 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47140 No alias F-box associated ubiquitination effector family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G47150 No alias F-box and associated interaction domains-containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
BP GO:0008360 regulation of cell shape IEP HCCA
BP GO:0009875 pollen-pistil interaction IEP HCCA
BP GO:0009886 post-embryonic animal morphogenesis IEP HCCA
BP GO:0010252 auxin homeostasis IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP HCCA
MF GO:0030570 pectate lyase activity IEP HCCA
BP GO:0043455 regulation of secondary metabolic process IEP HCCA
BP GO:0048316 seed development IEP HCCA
BP GO:0048437 floral organ development IEP HCCA
BP GO:0048440 carpel development IEP HCCA
BP GO:0048441 petal development IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0048445 carpel morphogenesis IEP HCCA
BP GO:0048446 petal morphogenesis IEP HCCA
BP GO:0048481 plant ovule development IEP HCCA
BP GO:0048608 reproductive structure development IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
BP GO:0080154 regulation of fertilization IEP HCCA
BP GO:0080155 regulation of double fertilization forming a zygote and endosperm IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
BP GO:1900376 regulation of secondary metabolite biosynthetic process IEP HCCA
BP GO:2000029 regulation of proanthocyanidin biosynthetic process IEP HCCA
BP GO:2000762 regulation of phenylpropanoid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013187 F-box-assoc_dom_typ3 198 323
IPR001810 F-box_dom 6 48
PLAZA 3.0 Dicots AT1G76830