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  5. Pp3c12_10950V3.1

Pp3c12_10950V3.1


Description : zinc knuckle (CCHC-type) family protein


Gene families : OG_01_0005605 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0005605_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_10950V3.1
Cluster HCCA: Cluster_55


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006464 cellular protein modification process IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 245 261
IPR001878 Znf_CCHC 152 167
IPR001878 Znf_CCHC 170 184
IPR001878 Znf_CCHC 87 102
IPR001878 Znf_CCHC 69 84
IPR001878 Znf_CCHC 106 121
IPR001878 Znf_CCHC 189 204
IPR001878 Znf_CCHC 125 139
No external refs found!