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  5. Pp3c12_16950V3.1

Pp3c12_16950V3.1


Description : Transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0003659 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0003659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_16950V3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Cre17.g724850 No alias WD-40 repeat-containing protein MSI2 OS=Arabidopsis thaliana 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g21540.1 No alias Histone-binding protein MSI1 homolog OS=Oryza sativa... 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR022052 Histone-bd_RBBP4_N 58 125
IPR001680 WD40_repeat 331 364
IPR001680 WD40_repeat 286 320
No external refs found!