Pp3c12_1830V3.1

Description : RNA-binding (RRM/RBD/RNP motifs) family protein with retrovirus zinc finger-like domain

Gene families : OG_01_0000078 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000078_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Pp3c12_1830V3.1
Cluster	HCCA: Cluster_287

Target	Alias	Description	ECC score	Gene Family Method
Cre17.g729150	No alias	No description available	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g08160.1	No alias	RNA chaperone (RZ1\|GR-RBP)	0.03	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_3360V3.1	No alias	cold, circadian rhythm, and RNA binding 1	0.04	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR001878	Znf_CCHC	118	133
IPR000504	RRM_dom	10	78

External Links

No external refs found!