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  5. AT1G77860

AT1G77860


Description : Rhomboid-related intramembrane serine protease family protein


Gene families : OG_01_0000448 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000448_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G77860
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT1G63120 No alias RHOMBOID-like 2 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0010022 meristem determinacy IEP HCCA
BP GO:0010582 floral meristem determinacy IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019499 cyanide metabolic process IEP HCCA
BP GO:0046202 cyanide biosynthetic process IEP HCCA
BP GO:0048654 anther morphogenesis IEP HCCA
BP GO:0048658 anther wall tapetum development IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0055046 microgametogenesis IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 118 256
PLAZA 3.0 Dicots AT1G77860