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  5. Pp3c12_7610V3.1

Pp3c12_7610V3.1


Description : Histone superfamily protein


Gene families : OG_01_0000046 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000046_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c12_7610V3.1
Cluster HCCA: Cluster_152

Target Alias Description ECC score Gene Family Method Actions
AT1G07790 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G37470 No alias Histone superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G45980 No alias Histone superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G46030 No alias Histone superfamily protein 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22880 No alias histone B2 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G59910 No alias Histone superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264800 No alias Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g264900 No alias Chromatin organisation.histones.H2B-type histone 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g265400 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g266750 No alias Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268100 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g268250 No alias Chromatin organisation.histones.H2B-type histone 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g271376 No alias Chromatin organisation.histones.H2B-type histone 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g273850 No alias Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274250 No alias Chromatin organisation.histones.H2B-type histone 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g274750 No alias Chromatin organisation.histones.H2B-type histone 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g275800 No alias Chromatin organisation.histones.H2B-type histone 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276550 No alias Chromatin organisation.histones.H2B-type histone 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre06.g276900 No alias Chromatin organisation.histones.H2B-type histone 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504550 No alias Chromatin organisation.histones.H2B-type histone 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g504700 No alias Chromatin organisation.histones.H2B-type histone 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g505600 No alias Chromatin organisation.histones.H2B-type histone 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g506200 No alias Chromatin organisation.histones.H2B-type histone 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g570050 No alias Chromatin organisation.histones.H2B-type histone 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre13.g591200 No alias Chromatin organisation.histones.H2B-type histone 0.2 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g709150 No alias Chromatin organisation.histones.H2B-type histone 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g710450 No alias Chromatin organisation.histones.H2B-type histone 0.4 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g711750 No alias Chromatin organisation.histones.H2B-type histone 0.33 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g713450 No alias Chromatin organisation.histones.H2B-type histone 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714050 No alias Chromatin organisation.histones.H2B-type histone 0.29 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g714550 No alias Chromatin organisation.histones.H2B-type histone 0.13 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g13450.1 No alias histone (H2B) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g04070.1 No alias histone (H2B) 0.67 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g07010.1 No alias histone (H2B) 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_15780V3.1 No alias Histone superfamily protein 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEA Interproscan
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 cellular amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 7 111
No external refs found!