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  5. Pp3c13_15330V3.1

Pp3c13_15330V3.1


Description : Ribosomal protein L4/L1 family


Gene families : OG_01_0008210 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0008210_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_15330V3.1
Cluster HCCA: Cluster_273

Target Alias Description ECC score Gene Family Method Actions
AT2G20060 No alias Ribosomal protein L4/L1 family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g520400 No alias No description available 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g00020.1 No alias component mtRPL4 of large ribosomal subunit proteome 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 74 262
No external refs found!