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  5. Pp3c13_15980V3.1

Pp3c13_15980V3.1


Description : ribulose bisphosphate carboxylase small chain 1A


Gene families : OG_01_0000042 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000042_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c13_15980V3.1
Cluster HCCA: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
AT1G67090 No alias ribulose bisphosphate carboxylase small chain 1A 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38410 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38420 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G38430 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g120100 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre02.g120150 No alias Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g06020.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g06030.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g06050.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g10850.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.16 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp4g15070.1 No alias small subunit of ribulose-1,5-bisphosphat... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c19_1840V3.1 No alias Ribulose bisphosphate carboxylase (small chain) family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c3_12530V3.1 No alias ribulose bisphosphate carboxylase small chain 1A 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_08256.1 No alias "small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_15633.1 No alias "small subunit of ribulose-1,5-bisphosphat... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR000894 RuBisCO_ssu_dom 154 264
No external refs found!