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Description : ribulose bisphosphate carboxylase small chain 1A
Gene families : OG_01_0000042 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000042_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Pp3c13_16000V3.1 | |
| Cluster | HCCA: Cluster_231 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G67090 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.15 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38410 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38420 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.17 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| AT5G38430 | No alias | Ribulose bisphosphate carboxylase (small chain) family protein | 0.12 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre02.g120100 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Cre02.g120150 | No alias | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp4g06050.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp4g10850.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.14 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Mp4g15070.1 | No alias | small subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Pp3c2_4100V3.1 | No alias | ribulose bisphosphate carboxylase small chain 1A | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_08256.1 | No alias | "small subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci | |
| Zci_15633.1 | No alias | "small subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000774 | adenyl-nucleotide exchange factor activity | IEP | HCCA |
| MF | GO:0005507 | copper ion binding | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
| CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
| MF | GO:0042802 | identical protein binding | IEP | HCCA |
| MF | GO:0042803 | protein homodimerization activity | IEP | HCCA |
| MF | GO:0043169 | cation binding | IEP | HCCA |
| MF | GO:0046872 | metal ion binding | IEP | HCCA |
| MF | GO:0046914 | transition metal ion binding | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| MF | GO:0051087 | chaperone binding | IEP | HCCA |
| MF | GO:0060590 | ATPase regulator activity | IEP | HCCA |
| MF | GO:0098772 | molecular function regulator | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |