1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c13_20360V3.1

Pp3c13_20360V3.1


Description : expansin A9


Gene families : OG_01_0000011 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000011_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_20360V3.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AT1G12560 No alias expansin A7 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G20190 No alias expansin 11 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G62980 No alias expansin A18 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G69530 No alias expansin A1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G28950 No alias expansin A6 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G37640 No alias Barwin-like endoglucanases superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G40610 No alias expansin A8 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G29030 No alias expansin A5 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G01630 No alias expansin A17 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G02260 No alias expansin A9 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G39280 No alias expansin A23 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22700.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22720.1 No alias Expansin-A4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp1g22730.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp2g18600.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g06900.1 No alias alpha-class expansin 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g01930.1 No alias alpha-class expansin 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c14_18030V3.1 No alias expansin A14 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c20_5780V3.1 No alias expansin A15 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_14900V3.1 No alias expansin A14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c8_870V3.1 No alias expansin A1 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
InterPro domains Description Start Stop
IPR007117 Expansin_CBD 169 248
IPR009009 RlpA-like_DPBB 75 158
No external refs found!