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AT1G78750


Description : F-box/RNI-like superfamily protein


Gene families : OG_01_0000057 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78750
Cluster HCCA: Cluster_74

Target Alias Description ECC score Gene Family Method Actions
AT1G32020 No alias F-box family protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G60400 No alias F-box/RNI-like superfamily protein 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66290 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G66320 No alias F-box/RNI-like superfamily protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G78760 No alias F-box/RNI-like superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G23955 No alias F-box family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22590 No alias Leucine Rich Repeat protein family 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22600 No alias FBD / Leucine Rich Repeat domains containing protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22680 No alias FUNCTIONS IN: molecular_function unknown; INVOLVED IN:... 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22720 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G22730 No alias F-box/RNI-like/FBD-like domains-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44940 No alias F-box/RNI-like superfamily protein 0.09 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G44970 No alias Protein with RNI-like/FBD-like domains 0.11 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53637 No alias No description available 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G53840 No alias F-box/RNI-like/FBD-like domains-containing protein 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0005375 copper ion transmembrane transporter activity IEP HCCA
MF GO:0008519 ammonium transmembrane transporter activity IEP HCCA
BP GO:0009555 pollen development IEP HCCA
MF GO:0015089 high-affinity copper ion transmembrane transporter activity IEP HCCA
MF GO:0015095 magnesium ion transmembrane transporter activity IEP HCCA
MF GO:0015398 high-affinity secondary active ammonium transmembrane transporter activity IEP HCCA
BP GO:0015695 organic cation transport IEP HCCA
BP GO:0048444 floral organ morphogenesis IEP HCCA
BP GO:0072488 ammonium transmembrane transport IEP HCCA
BP GO:0090697 post-embryonic plant organ morphogenesis IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 19 56
IPR013101 Leu-rich_rpt_2 175 200
IPR006566 FBD 383 426
PLAZA 3.0 Dicots AT1G78750