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  5. Pp3c13_2400V3.1

Pp3c13_2400V3.1


Description : EF hand calcium-binding protein family


Gene families : OG_01_0000095 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c13_2400V3.1
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
AT1G05990 No alias EF hand calcium-binding protein family 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G73630 No alias EF hand calcium-binding protein family 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g10070.1 No alias Calmodulin-like protein 5 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g18000.1 No alias Calmodulin-like protein 3 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g20470.1 No alias Probable calcium-binding protein CML22 OS=Oryza sativa... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c12_6540V3.1 No alias EF hand calcium-binding protein family 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of transcription, DNA-templated IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!