1. Home
  2. Species
  3. Arabidopsis thaliana
  4. Sequence
  5. AT1G78790

AT1G78790


Description : unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2008 (InterPro:IPR018552); Has 69 Blast hits to 69 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 33; Fungi - 0; Plants - 33; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink).


Gene families : OG_01_0010059 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G78790
Cluster HCCA: Cluster_176


Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0006661 phosphatidylinositol biosynthetic process RCA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000795 synaptonemal complex IEP HCCA
BP GO:0002376 immune system process IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005496 steroid binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
CC GO:0005712 chiasma IEP HCCA
CC GO:0005768 endosome IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
MF GO:0008476 protein-tyrosine sulfotransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009593 detection of chemical stimulus IEP HCCA
BP GO:0009631 cold acclimation IEP HCCA
BP GO:0009646 response to absence of light IEP HCCA
BP GO:0009647 skotomorphogenesis IEP HCCA
BP GO:0009691 cytokinin biosynthetic process IEP HCCA
BP GO:0009720 detection of hormone stimulus IEP HCCA
BP GO:0009726 detection of endogenous stimulus IEP HCCA
BP GO:0009729 detection of brassinosteroid stimulus IEP HCCA
BP GO:0009733 response to auxin IEP HCCA
BP GO:0009742 brassinosteroid mediated signaling pathway IEP HCCA
BP GO:0009911 positive regulation of flower development IEP HCCA
BP GO:0010082 regulation of root meristem growth IEP HCCA
BP GO:0010268 brassinosteroid homeostasis IEP HCCA
BP GO:0010584 pollen exine formation IEP HCCA
BP GO:0010588 cotyledon vascular tissue pattern formation IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
CC GO:0031410 cytoplasmic vesicle IEP HCCA
CC GO:0031982 vesicle IEP HCCA
BP GO:0032204 regulation of telomere maintenance IEP HCCA
CC GO:0032300 mismatch repair complex IEP HCCA
CC GO:0032390 MutLbeta complex IEP HCCA
BP GO:0032501 multicellular organismal process IEP HCCA
BP GO:0032504 multicellular organism reproduction IEP HCCA
BP GO:0042742 defense response to bacterium IEP HCCA
BP GO:0043247 telomere maintenance in response to DNA damage IEP HCCA
BP GO:0043401 steroid hormone mediated signaling pathway IEP HCCA
MF GO:0046982 protein heterodimerization activity IEP HCCA
BP GO:0048582 positive regulation of post-embryonic development IEP HCCA
BP GO:0048657 anther wall tapetum cell differentiation IEP HCCA
BP GO:0055088 lipid homeostasis IEP HCCA
CC GO:0097708 intracellular vesicle IEP HCCA
BP GO:0098542 defense response to other organism IEP HCCA
CC GO:0099086 synaptonemal structure IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990391 DNA repair complex IEP HCCA
BP GO:2000243 positive regulation of reproductive process IEP HCCA
InterPro domains Description Start Stop
IPR018552 CENP-X 53 104
PLAZA 3.0 Dicots AT1G78790