1. Home
  2. Species
  3. Physcomitrella patens
  4. Sequence
  5. Pp3c14_14600V3.1

Pp3c14_14600V3.1


Description : RING/U-box superfamily protein


Gene families : OG_01_0000140 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000140_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_14600V3.1
Cluster HCCA: Cluster_286

Target Alias Description ECC score Gene Family Method Actions
AT1G35330 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G35000 No alias RING/U-box superfamily protein 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G40070 No alias RING/U-box superfamily protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G27420 No alias carbon/nitrogen insensitive 1 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g15250.1 No alias RING-H2-class E3 ligase 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_14177.1 No alias no annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000030 mannosyltransferase activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
CC GO:0016021 integral component of membrane IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
CC GO:0030176 integral component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031227 intrinsic component of endoplasmic reticulum membrane IEP HCCA
CC GO:0031300 intrinsic component of organelle membrane IEP HCCA
CC GO:0031301 integral component of organelle membrane IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!