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  5. AT1G79480

AT1G79480


Description : Carbohydrate-binding X8 domain superfamily protein


Gene families : OG_01_0000099 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000099_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT1G79480
Cluster HCCA: Cluster_128

Target Alias Description ECC score Gene Family Method Actions
AT1G09460 No alias Carbohydrate-binding X8 domain superfamily protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G18650 No alias plasmodesmata callose-binding protein 3 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G26450 No alias Carbohydrate-binding X8 domain superfamily protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
CC GO:0005634 nucleus ISM Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003785 actin monomer binding IEP HCCA
MF GO:0004014 adenosylmethionine decarboxylase activity IEP HCCA
MF GO:0004630 phospholipase D activity IEP HCCA
MF GO:0004816 asparagine-tRNA ligase activity IEP HCCA
BP GO:0006421 asparaginyl-tRNA aminoacylation IEP HCCA
BP GO:0009820 alkaloid metabolic process IEP HCCA
BP GO:0009821 alkaloid biosynthetic process IEP HCCA
CC GO:0009897 external side of plasma membrane IEP HCCA
BP GO:0010496 intercellular transport IEP HCCA
BP GO:0010497 plasmodesmata-mediated intercellular transport IEP HCCA
BP GO:0010675 regulation of cellular carbohydrate metabolic process IEP HCCA
MF GO:0016688 L-ascorbate peroxidase activity IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0030247 polysaccharide binding IEP HCCA
MF GO:0031176 endo-1,4-beta-xylanase activity IEP HCCA
CC GO:0031209 SCAR complex IEP HCCA
CC GO:0031224 intrinsic component of membrane IEP HCCA
CC GO:0031225 anchored component of membrane IEP HCCA
CC GO:0031226 intrinsic component of plasma membrane IEP HCCA
BP GO:0032881 regulation of polysaccharide metabolic process IEP HCCA
BP GO:0032956 regulation of actin cytoskeleton organization IEP HCCA
BP GO:0032970 regulation of actin filament-based process IEP HCCA
MF GO:0043621 protein self-association IEP HCCA
BP GO:0046466 membrane lipid catabolic process IEP HCCA
CC GO:0046658 anchored component of plasma membrane IEP HCCA
BP GO:0051125 regulation of actin nucleation IEP HCCA
BP GO:0051127 positive regulation of actin nucleation IEP HCCA
BP GO:0051493 regulation of cytoskeleton organization IEP HCCA
BP GO:0051495 positive regulation of cytoskeleton organization IEP HCCA
CC GO:0071944 cell periphery IEP HCCA
MF GO:0097599 xylanase activity IEP HCCA
CC GO:0098552 side of membrane IEP HCCA
BP GO:0110053 regulation of actin filament organization IEP HCCA
BP GO:1902903 regulation of supramolecular fiber organization IEP HCCA
BP GO:1902905 positive regulation of supramolecular fiber organization IEP HCCA
BP GO:2000280 regulation of root development IEP HCCA
BP GO:2000904 regulation of starch metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR012946 X8 311 381
PLAZA 3.0 Dicots AT1G79480