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  5. Pp3c14_2730V3.1

Pp3c14_2730V3.1


Description : nuclear RNA polymerase A1


Gene families : OG_01_0004310 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0004310_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c14_2730V3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AT3G57660 No alias nuclear RNA polymerase A1 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g529600 No alias RNA biosynthesis.DNA-dependent RNA polymerase (Pol)... 0.12 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp6g07700.1 No alias subunit 1 of Pol I RNA polymerase 0.1 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00489.2 No alias subunit NRPA1 of RNA polymerase I complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA

No InterPro domains available for this sequence

No external refs found!