AT1G07660

Description : Histone superfamily protein

Gene families : OG_01_0000034 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000034_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT1G07660
Cluster	HCCA: Cluster_52

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp5g22460.1	No alias	histone (H4)	0.02	OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
CC	GO:0005774	vacuolar membrane	IDA	Interproscan
CC	GO:0005829	cytosol	IDA	Interproscan
CC	GO:0005886	plasma membrane	IDA	Interproscan
CC	GO:0005911	cell-cell junction	None	Extended
CC	GO:0009506	plasmodesma	IDA	Interproscan
CC	GO:0009507	chloroplast	IDA	Interproscan
CC	GO:0009536	plastid	None	Extended
CC	GO:0016020	membrane	None	Extended
CC	GO:0030054	cell junction	None	Extended
CC	GO:0031090	organelle membrane	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0070161	anchoring junction	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0098588	bounding membrane of organelle	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
CC	GO:0000930	gamma-tubulin complex	IEP	HCCA
CC	GO:0005635	nuclear envelope	IEP	HCCA
CC	GO:0005819	spindle	IEP	HCCA
CC	GO:0005828	kinetochore microtubule	IEP	HCCA
CC	GO:0005874	microtubule	IEP	HCCA
CC	GO:0005876	spindle microtubule	IEP	HCCA
BP	GO:0006661	phosphatidylinositol biosynthetic process	IEP	HCCA
BP	GO:0007020	microtubule nucleation	IEP	HCCA
BP	GO:0007051	spindle organization	IEP	HCCA
BP	GO:0007052	mitotic spindle organization	IEP	HCCA
CC	GO:0009524	phragmoplast	IEP	HCCA
CC	GO:0009574	preprophase band	IEP	HCCA
BP	GO:0010154	fruit development	IEP	HCCA
BP	GO:0040034	regulation of development, heterochronic	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA
BP	GO:0048506	regulation of timing of meristematic phase transition	IEP	HCCA
BP	GO:0048509	regulation of meristem development	IEP	HCCA
BP	GO:0048510	regulation of timing of transition from vegetative to reproductive phase	IEP	HCCA
BP	GO:0048530	fruit morphogenesis	IEP	HCCA
BP	GO:0051418	microtubule nucleation by microtubule organizing center	IEP	HCCA
CC	GO:0072686	mitotic spindle	IEP	HCCA
BP	GO:0080060	integument development	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
BP	GO:1902850	microtubule cytoskeleton organization involved in mitosis	IEP	HCCA
BP	GO:1903047	mitotic cell cycle process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR035425	CENP-T/H4_C	36	96

External Links

PLAZA 3.0 Dicots	AT1G07660