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  5. Pp3c15_14410V3.1

Pp3c15_14410V3.1


Description : Ribosomal protein L11 family protein


Gene families : OG_01_0000897 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000897_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c15_14410V3.1
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AT2G37190 No alias Ribosomal protein L11 family protein 0.42 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G53430 No alias Ribosomal protein L11 family protein 0.23 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G60670 No alias Ribosomal protein L11 family protein 0.25 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre12.g528750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.31 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp3g02020.1 No alias component RPL12 of LSU proteome component 0.39 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_06352.1 No alias component uL11 of LSU proteome component 0.18 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR020783 Ribosomal_L11_C 75 144
IPR020784 Ribosomal_L11_N 10 70
No external refs found!