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  5. Pp3c16_15410V3.1

Pp3c16_15410V3.1


Description : Zinc finger C-x8-C-x5-C-x3-H type family protein


Gene families : OG_01_0001953 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001953_tree

Sequence : coding (download), protein (download)


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Type Description Actions
Neighborhood HRR: Pp3c16_15410V3.1
Cluster HCCA: Cluster_288

Target Alias Description ECC score Gene Family Method Actions
AT1G27650 No alias U2 snRNP auxiliary factor small subunit, putative 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G42820 No alias Zinc finger C-x8-C-x5-C-x3-H type family protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
CC GO:0008303 caspase complex IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016866 intramolecular transferase activity IEP HCCA
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP HCCA
CC GO:0042765 GPI-anchor transamidase complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140534 endoplasmic reticulum protein-containing complex IEP HCCA
CC GO:1905368 peptidase complex IEP HCCA
CC GO:1905369 endopeptidase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!