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  5. Pp3c16_4220V3.1

Pp3c16_4220V3.1


Description : Transcription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein


Gene families : OG_01_0000306 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000306_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c16_4220V3.1
Cluster HCCA: Cluster_296

Target Alias Description ECC score Gene Family Method Actions
AT1G08620 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT1G63490 No alias transcription factor jumonji (jmjC) domain-containing protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G38950 No alias Transcription factor jumonji (jmj) family protein / zinc... 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G20400 No alias JUMONJI 14 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g17910.1 No alias histone demethylase (KDM5). transcription factor (JUMONJI) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_00379.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004527 exonuclease activity IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
MF GO:0008408 3'-5' exonuclease activity IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA

No InterPro domains available for this sequence

No external refs found!