AT2G03060

Description : AGAMOUS-like 30

Gene families : OG_01_0009885 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AT2G03060
Cluster	HCCA: Cluster_60

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISS	Interproscan
MF	GO:0003700	DNA-binding transcription factor activity	ISS	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	ISM	Interproscan
BP	GO:0007275	multicellular organism development	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009555	pollen development	IGI	Interproscan
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010208	pollen wall assembly	None	Extended
BP	GO:0010584	pollen exine formation	RCA	Interproscan
BP	GO:0010927	cellular component assembly involved in morphogenesis	None	Extended
BP	GO:0016043	cellular component organization	None	Extended
BP	GO:0022607	cellular component assembly	None	Extended
BP	GO:0032501	multicellular organismal process	None	Extended
BP	GO:0032502	developmental process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0045229	external encapsulating structure organization	None	Extended
BP	GO:0048229	gametophyte development	None	Extended
BP	GO:0048646	anatomical structure formation involved in morphogenesis	None	Extended
BP	GO:0048856	anatomical structure development	None	Extended
BP	GO:0071840	cellular component organization or biogenesis	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000159	protein phosphatase type 2A complex	IEP	HCCA
BP	GO:0000902	cell morphogenesis	IEP	HCCA
BP	GO:0000904	cell morphogenesis involved in differentiation	IEP	HCCA
BP	GO:0003006	developmental process involved in reproduction	IEP	HCCA
MF	GO:0004439	phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity	IEP	HCCA
MF	GO:0004650	polygalacturonase activity	IEP	HCCA
MF	GO:0005092	GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005093	Rab GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005094	Rho GDP-dissociation inhibitor activity	IEP	HCCA
MF	GO:0005200	structural constituent of cytoskeleton	IEP	HCCA
CC	GO:0005737	cytoplasm	IEP	HCCA
CC	GO:0005856	cytoskeleton	IEP	HCCA
CC	GO:0005884	actin filament	IEP	HCCA
CC	GO:0005938	cell cortex	IEP	HCCA
CC	GO:0005963	magnesium-dependent protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0007010	cytoskeleton organization	IEP	HCCA
BP	GO:0007015	actin filament organization	IEP	HCCA
BP	GO:0007204	positive regulation of cytosolic calcium ion concentration	IEP	HCCA
BP	GO:0008064	regulation of actin polymerization or depolymerization	IEP	HCCA
CC	GO:0008287	protein serine/threonine phosphatase complex	IEP	HCCA
BP	GO:0009306	protein secretion	IEP	HCCA
BP	GO:0009653	anatomical structure morphogenesis	IEP	HCCA
BP	GO:0009664	plant-type cell wall organization	IEP	HCCA
MF	GO:0009672	auxin:proton symporter activity	IEP	HCCA
BP	GO:0009826	unidimensional cell growth	IEP	HCCA
BP	GO:0009827	plant-type cell wall modification	IEP	HCCA
BP	GO:0009860	pollen tube growth	IEP	HCCA
BP	GO:0009865	pollen tube adhesion	IEP	HCCA
BP	GO:0009932	cell tip growth	IEP	HCCA
BP	GO:0009966	regulation of signal transduction	IEP	HCCA
BP	GO:0010191	mucilage metabolic process	IEP	HCCA
BP	GO:0010192	mucilage biosynthetic process	IEP	HCCA
BP	GO:0010214	seed coat development	IEP	HCCA
BP	GO:0010252	auxin homeostasis	IEP	HCCA
BP	GO:0010315	auxin efflux	IEP	HCCA
BP	GO:0010646	regulation of cell communication	IEP	HCCA
BP	GO:0010928	regulation of auxin mediated signaling pathway	IEP	HCCA
BP	GO:0016049	cell growth	IEP	HCCA
CC	GO:0017119	Golgi transport complex	IEP	HCCA
BP	GO:0017157	regulation of exocytosis	IEP	HCCA
BP	GO:0022414	reproductive process	IEP	HCCA
BP	GO:0023051	regulation of signaling	IEP	HCCA
CC	GO:0030133	transport vesicle	IEP	HCCA
MF	GO:0030234	enzyme regulator activity	IEP	HCCA
MF	GO:0030695	GTPase regulator activity	IEP	HCCA
BP	GO:0030832	regulation of actin filament length	IEP	HCCA
BP	GO:0030834	regulation of actin filament depolymerization	IEP	HCCA
BP	GO:0032940	secretion by cell	IEP	HCCA
BP	GO:0032956	regulation of actin cytoskeleton organization	IEP	HCCA
BP	GO:0032957	inositol trisphosphate metabolic process	IEP	HCCA
BP	GO:0032970	regulation of actin filament-based process	IEP	HCCA
MF	GO:0034593	phosphatidylinositol bisphosphate phosphatase activity	IEP	HCCA
MF	GO:0034595	phosphatidylinositol phosphate 5-phosphatase activity	IEP	HCCA
BP	GO:0035023	regulation of Rho protein signal transduction	IEP	HCCA
BP	GO:0035024	negative regulation of Rho protein signal transduction	IEP	HCCA
BP	GO:0035592	establishment of protein localization to extracellular region	IEP	HCCA
BP	GO:0040007	growth	IEP	HCCA
BP	GO:0042545	cell wall modification	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
CC	GO:0045177	apical part of cell	IEP	HCCA
BP	GO:0046174	polyol catabolic process	IEP	HCCA
BP	GO:0046578	regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046580	negative regulation of Ras protein signal transduction	IEP	HCCA
BP	GO:0046838	phosphorylated carbohydrate dephosphorylation	IEP	HCCA
BP	GO:0046855	inositol phosphate dephosphorylation	IEP	HCCA
BP	GO:0046903	secretion	IEP	HCCA
BP	GO:0048354	mucilage biosynthetic process involved in seed coat development	IEP	HCCA
BP	GO:0048359	mucilage metabolic process involved in seed coat development	IEP	HCCA
BP	GO:0048588	developmental cell growth	IEP	HCCA
BP	GO:0048589	developmental growth	IEP	HCCA
BP	GO:0048868	pollen tube development	IEP	HCCA
BP	GO:0050848	regulation of calcium-mediated signaling	IEP	HCCA
BP	GO:0050850	positive regulation of calcium-mediated signaling	IEP	HCCA
BP	GO:0051046	regulation of secretion	IEP	HCCA
BP	GO:0051056	regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051058	negative regulation of small GTPase mediated signal transduction	IEP	HCCA
BP	GO:0051480	regulation of cytosolic calcium ion concentration	IEP	HCCA
BP	GO:0051493	regulation of cytoskeleton organization	IEP	HCCA
BP	GO:0051648	vesicle localization	IEP	HCCA
BP	GO:0051650	establishment of vesicle localization	IEP	HCCA
BP	GO:0051703	biological process involved in intraspecies interaction between organisms	IEP	HCCA
MF	GO:0052866	phosphatidylinositol phosphate phosphatase activity	IEP	HCCA
BP	GO:0060560	developmental growth involved in morphogenesis	IEP	HCCA
MF	GO:0060589	nucleoside-triphosphatase regulator activity	IEP	HCCA
BP	GO:0060627	regulation of vesicle-mediated transport	IEP	HCCA
CC	GO:0070382	exocytic vesicle	IEP	HCCA
BP	GO:0071545	inositol phosphate catabolic process	IEP	HCCA
BP	GO:0071554	cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071555	cell wall organization	IEP	HCCA
BP	GO:0071669	plant-type cell wall organization or biogenesis	IEP	HCCA
BP	GO:0071692	protein localization to extracellular region	IEP	HCCA
MF	GO:0080161	auxin transmembrane transporter activity	IEP	HCCA
BP	GO:0097435	supramolecular fiber organization	IEP	HCCA
BP	GO:0098609	cell-cell adhesion	IEP	HCCA
MF	GO:0098772	molecular function regulator	IEP	HCCA
CC	GO:0099080	supramolecular complex	IEP	HCCA
CC	GO:0099081	supramolecular polymer	IEP	HCCA
CC	GO:0099503	secretory vesicle	IEP	HCCA
CC	GO:0099512	supramolecular fiber	IEP	HCCA
CC	GO:0099513	polymeric cytoskeletal fiber	IEP	HCCA
MF	GO:0106019	phosphatidylinositol-4,5-bisphosphate phosphatase activity	IEP	HCCA
BP	GO:0110053	regulation of actin filament organization	IEP	HCCA
BP	GO:0140352	export from cell	IEP	HCCA
BP	GO:1901879	regulation of protein depolymerization	IEP	HCCA
BP	GO:1902531	regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902532	negative regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902533	positive regulation of intracellular signal transduction	IEP	HCCA
BP	GO:1902903	regulation of supramolecular fiber organization	IEP	HCCA
CC	GO:1903293	phosphatase complex	IEP	HCCA
BP	GO:1903530	regulation of secretion by cell	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002100	TF_MADSbox	11	53

External Links

PLAZA 3.0 Dicots	AT2G03060

AT2G03060

Expression Profile

Co-expression Networks

Functional Annotation