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  5. Pp3c17_18640V3.1

Pp3c17_18640V3.1


Description : MIF4G domain-containing protein / MA3 domain-containing protein


Gene families : OG_01_0001109 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_18640V3.1
Cluster HCCA: Cluster_282

Target Alias Description ECC score Gene Family Method Actions
AT5G57870 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre17.g696250 No alias Eukaryotic translation initiation factor 4G OS=Triticum aestivum 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g16430.1 No alias component eIF-iso4G of eIF-iso4F unwinding complex 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c17_18440V3.1 No alias MIF4G domain-containing protein / MA3 domain-containing protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR003890 MIF4G-like_typ-3 243 467
IPR003891 Initiation_fac_eIF4g_MI 687 795
No external refs found!