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  5. Pp3c17_19880V3.1

Pp3c17_19880V3.1


Description : ankyrin repeat family protein


Gene families : OG_01_0006664 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0006664_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_19880V3.1
Cluster HCCA: Cluster_174

Target Alias Description ECC score Gene Family Method Actions
AT5G65860 No alias ankyrin repeat family protein 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre01.g050050 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp8g08490.1 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP HCCA
CC GO:0005730 nucleolus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0022613 ribonucleoprotein complex biogenesis IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042254 ribosome biogenesis IEP HCCA
BP GO:0044085 cellular component biogenesis IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!