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  5. Pp3c17_3030V3.1

Pp3c17_3030V3.1


Description : No annotation


Gene families : OG_01_0001207 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0001207_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c17_3030V3.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
Pp3c11_26100V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c1_38370V3.1 No alias No annotation 0.08 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_16620V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c24_490V3.1 No alias No annotation 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c2_15650V3.1 No alias No annotation 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Pp3c7_17360V3.1 No alias No annotation 0.02 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006298 mismatch repair IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0030983 mismatched DNA binding IEP HCCA
BP GO:0032200 telomere organization IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!