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  5. AT2G03610

AT2G03610


Description : F-box family protein


Gene families : OG_01_0000101 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0000101_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AT2G03610
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AT1G10110 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04810 No alias Protein of unknown function (DUF295) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04830 No alias Protein of unknown function (DUF295) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G04840 No alias Protein of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G05970 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT2G33200 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03726 No alias Protein of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G03730 No alias F-box family protein with a domain of unknown function (DUF295) 0.07 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT3G22345 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G10820 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12810 No alias F-box family protein 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G12820 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G14165 No alias F-box family protein-related 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22060 No alias F-box family protein with a domain of unknown function (DUF295) 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22165 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT4G22660 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G14160 No alias F-box family protein 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
AT5G25290 No alias F-box family protein with a domain of unknown function (DUF295) 0.05 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function ND Interproscan
CC GO:0005634 nucleus ISM Interproscan
BP GO:0008150 biological_process ND Interproscan
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Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003887 DNA-directed DNA polymerase activity IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006303 double-strand break repair via nonhomologous end joining IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006312 mitotic recombination IEP HCCA
BP GO:0007059 chromosome segregation IEP HCCA
BP GO:0007062 sister chromatid cohesion IEP HCCA
BP GO:0007131 reciprocal meiotic recombination IEP HCCA
BP GO:0030198 extracellular matrix organization IEP HCCA
MF GO:0034061 DNA polymerase activity IEP HCCA
BP GO:0035825 homologous recombination IEP HCCA
BP GO:0042138 meiotic DNA double-strand break formation IEP HCCA
BP GO:0043062 extracellular structure organization IEP HCCA
BP GO:0045132 meiotic chromosome segregation IEP HCCA
BP GO:0051026 chiasma assembly IEP HCCA
BP GO:0061982 meiosis I cell cycle process IEP HCCA
BP GO:0090305 nucleic acid phosphodiester bond hydrolysis IEP HCCA
BP GO:0098813 nuclear chromosome segregation IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
BP GO:0140527 reciprocal homologous recombination IEP HCCA
InterPro domains Description Start Stop
IPR001810 F-box_dom 21 60
IPR005174 DUF295 141 190
PLAZA 3.0 Dicots AT2G03610