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  5. Pp3c18_19045V3.1

Pp3c18_19045V3.1


Description : chromatin remodeling factor CHD3 (PICKLE)


Gene families : OG_01_0002062 (OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci) Phylogenetic Tree(s): OG0002062_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Pp3c18_19045V3.1
Cluster HCCA: Cluster_27

Target Alias Description ECC score Gene Family Method Actions
AT2G25170 No alias chromatin remodeling factor CHD3 (PICKLE) 0.04 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Cre08.g377200 No alias CHD3-type chromatin-remodeling factor PICKLE... 0.03 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Mp5g24460.1 No alias chromatin remodeling factor (Chd3/Mi-2) 0.06 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci
Zci_04520.2 No alias CHD3-type chromatin remodeling factor (PKL/PKR) 0.01 OrthoFinder output from Ath, Cre, Mpo, Ppa and Zci

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0017038 protein import IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0034613 cellular protein localization IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!